| Gene | RNAi | Also known as | Flybase ID | Annotation symbol |
|---|---|---|---|---|
| Su(var)2-HP2 (1) | 25972 (III) | HP2 | FBgn0026427 | CG12864 |
| Tep1 (2) | 32856 (III) | TepI, dTEPI, BG:DS00365 .2 | FBgn0041183 | CG18096 |
| trio (2) | 40137 (III) | DTrio, l(3)S095914, l(3)S036810, M89 | FBgn0024277 | CG18214 |
| Toll-7 | 30488 (III) | Tl-7 | FBgn0034476 | CG8595 |
| U2af38 (1) | 3582R-2 (III) | U2AF, dU2AF38, dU2AF38 | FBgn0017457 | CG3582 |
| wit (2) | 42244 (III) | l(3)64Aa, STK-D, SE20 | FBgn0024179 | CG10776 |
| vap | 44638 (III) | RasGAP, D-RasGAP | FBgn0003969 | CG9209 |
| zormin (1) | 11953R-2 (III) | FBgn0052311 | CG33484 | |
| CG10623 (1) | 10623R-3 (III) | FBgn0032727 | CG10623 | |
| CDK5 | 8203R-3 (III) | FBgn0013762 | CG8203 | |
| CadN (2) | 41982 (III) | Ncad, DNcad, N-Cad, N-cadherin, DN-Cad | FBgn0015609 | CG7100 |
| brv2 (2) | 31671 (III) | FBgn0036712 | CG16793 | |
| bent | 46252 (III) | bt, bent, l(4)23, l(4)2, projectin, CT8086 | FBgn0005666 | CG32019 |
| aub | 30124 (III) | sting | FBgn0000146 | CG6137 |
| Apc2 | 22290 (X) | dAPC2, E-APC, D-APC2, APC | FBgn0026598 | CG6193 |
| Adar (2) | 28311 (III) | dADAR, EG:BACN35H14 .1, hypnos-2 | FBgn0026086 | CG12598 |
| CG11318 (2) | 51792 (III) | FBgn0039818 | CG11318 | |
| CG1311 (2) | 12242 (III) | Ctl1 | FBgn0035523 | CG1311 |
| CG15395 (2) | 39929 (III) | FBgn0031440 | CG15395 | |
| CG31999 (1) | 31999R1 (III) | FBgn0051999 | CG31999 | |
| CG34113 (2) | 22742 (III) | side-III, Dm_3R:9314 | FBgn0083949 | CG34113 |
| CG42817 (2) | 25882 (III) | FBgn0261999 | CG42817 | |
| CG5037 (2) | 31169 (III) | FBgn0032222 | CG5037 | |
| CG8027 | 8027R-3 (III) | FBgn0033392 | CG8027 | |
| CG6480 | 23447 (III) | FRG1 | FBgn0036964 | CG6480 |
